BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C07LP1|AL425502
(1075 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1602 682 0.0
>3x_Contig1602
Length = 12694
Score = 682 bits (343), Expect = 0.0
Identities = 392/404 (97%), Gaps = 6/404 (1%)
Strand = Plus / Plus
Query: 635 tgacaatactttcaatgtaaccaatcctgcgagttagctgccgaacacgtacgtkacaaa 694
||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||
Sbjct: 1 tgacaatactttcaatgta-ccaatcctgcgagtaagctgccgaacacgtacgtgacaaa 59
Query: 695 atcagccagcttcattgtttgtatatcaattgaaaagtagcccaggacacgcggctgact 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 atcagccagcttcattgtttgtatatcaattgaaaagtagcccaggacacgcggctgact 119
Query: 755 tgtttaactcgtaactaacgttcgctaatatatttatatcaggacattaaggcaagattt 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgtttaactcgtaactaacgttcgctaatatatttatatcaggacattaaggcaagattt 179
Query: 815 tcatatattgtacctcatcttttatgtgtaaaataagattgttcacaatctgagtttcct 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tcatatattgtacctcatcttttatgtgtaaaataagattgttcacaatctgagtttcct 239
Query: 875 tatcgttgaaactgaaccggagttatccgcatagacacgacagatcttaaaataagagag 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tatcgttgaaactgaaccggagttatccgcatagacacgacagatcttaaaataagagag 299
Query: 935 actataaaaagggaggcgggtgatgcttatac-aaatatgtatatgtwa-cyacgaatgt 992
|||||||||||| ||||||||||||||||||| |||||||||||||| | | ||||||||
Sbjct: 300 actataaaaaggaaggcgggtgatgcttatacaaaatatgtatatgttacctacgaatgt 359
Query: 993 ggatttgatg-accatcatttcaagtgc--atttcatttgattt 1033
|||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 360 ggatttgatgaaccatcatttcaagtgctattttcatttgattt 403
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7937
Number of Sequences: 1807
Number of extensions: 7937
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 1075
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1059
effective length of database: 10,329,639
effective search space: 10939087701
effective search space used: 10939087701
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)